The current version of the CURP program supports Mac and Linux systems.
2.1. System Requirements¶
The CURP program has been tested on the following systems:
OS Version: CentOS 6.x, Ubuntu 18.x
OS Version: Marvericks or Yosemite with XCode 6.1
CURP runs on python2.7 and requires numpy to be installed. The system should be working under openMPI.
pip install Curp or any flavor of pip (
conda install curp,
pip install --user curp,
pipenv install curp, …)
If you want to develop curp or simply access to its source you can install it through its GitHub repository:
git clone https://github.com/yamatolab/current-calculations-for-proteins.git
In the created directory, simply run
pip install --user . or
python setup.py install --user. If you are admin and want every user of the machine to be able to use curp, use
pip install . instead.
2.3. Running CURP¶
To run CURP, simply enter
curp compute <input_file>.
A few commands are also available from the terminal to analyze CURP results:
curp conv-trj and
The users set the CURP parameters in <input_file> (default: run.cfg).
Test calculations of curp can be run by cloning the GitHab repository, then running